2 Commits 6f502a25ef ... 8a3496fffe

Author SHA1 Message Date
  anton-prof-krausstraat-152-delft 8a3496fffe documentation update 2 years ago
  anton-prof-krausstraat-152-delft d8d046f0ac misc 2 years ago

+ 0 - 120
GTL-1.2.4/dsmake.output

@@ -1,120 +0,0 @@
-:)
-make
-make[1]: Entering directory '/home/gold/misc/src/regraphlet/regraphlet/orig/GTL-1.2.4'
-make  all-recursive
-make[2]: Entering directory '/home/gold/misc/src/regraphlet/regraphlet/orig/GTL-1.2.4'
-Making all in doc
-make[3]: Entering directory '/home/gold/misc/src/regraphlet/regraphlet/orig/GTL-1.2.4/doc'
-Making all in userguide
-make[4]: Entering directory '/home/gold/misc/src/regraphlet/regraphlet/orig/GTL-1.2.4/doc/userguide'
-make[4]: Nothing to be done for 'all'.
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-make[4]: Nothing to be done for 'all-am'.
-make[4]: Leaving directory '/home/gold/misc/src/regraphlet/regraphlet/orig/GTL-1.2.4/doc'
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-Making all in src
-make[3]: Entering directory '/home/gold/misc/src/regraphlet/regraphlet/orig/GTL-1.2.4/src'
-/bin/bash ../libtool --silent  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I..  -I../include -I../include -I../include/   -g -O2 -MT gml_scanner.lo -MD -MP -MF .deps/gml_scanner.Tpo -c -o gml_scanner.lo gml_scanner.cpp
-mv -f .deps/gml_scanner.Tpo .deps/gml_scanner.Plo
-/bin/bash ../libtool --silent  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I..  -I../include -I../include -I../include/   -g -O2 -MT gml_parser.lo -MD -MP -MF .deps/gml_parser.Tpo -c -o gml_parser.lo gml_parser.cpp
-mv -f .deps/gml_parser.Tpo .deps/gml_parser.Plo
-/bin/bash ../libtool --silent  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I..  -I../include -I../include -I../include/   -g -O2 -MT edge.lo -MD -MP -MF .deps/edge.Tpo -c -o edge.lo edge.cpp
-mv -f .deps/edge.Tpo .deps/edge.Plo
-/bin/bash ../libtool --silent  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I..  -I../include -I../include -I../include/   -g -O2 -MT graph.lo -MD -MP -MF .deps/graph.Tpo -c -o graph.lo graph.cpp
-mv -f .deps/graph.Tpo .deps/graph.Plo
-/bin/bash ../libtool --silent  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I..  -I../include -I../include -I../include/   -g -O2 -MT node.lo -MD -MP -MF .deps/node.Tpo -c -o node.lo node.cpp
-mv -f .deps/node.Tpo .deps/node.Plo
-/bin/bash ../libtool --silent  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I..  -I../include -I../include -I../include/   -g -O2 -MT dfs.lo -MD -MP -MF .deps/dfs.Tpo -c -o dfs.lo dfs.cpp
-mv -f .deps/dfs.Tpo .deps/dfs.Plo
-/bin/bash ../libtool --silent  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I..  -I../include -I../include -I../include/   -g -O2 -MT biconnectivity.lo -MD -MP -MF .deps/biconnectivity.Tpo -c -o biconnectivity.lo biconnectivity.cpp
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-/bin/bash ../libtool --silent  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I..  -I../include -I../include -I../include/   -g -O2 -MT st_number.lo -MD -MP -MF .deps/st_number.Tpo -c -o st_number.lo st_number.cpp
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-/bin/bash ../libtool --silent  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I..  -I../include -I../include -I../include/   -g -O2 -MT embedding.lo -MD -MP -MF .deps/embedding.Tpo -c -o embedding.lo embedding.cpp
-mv -f .deps/embedding.Tpo .deps/embedding.Plo
-/bin/bash ../libtool --silent  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I..  -I../include -I../include -I../include/   -g -O2 -MT pq_node.lo -MD -MP -MF .deps/pq_node.Tpo -c -o pq_node.lo pq_node.cpp
-mv -f .deps/pq_node.Tpo .deps/pq_node.Plo
-/bin/bash ../libtool --silent  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I..  -I../include -I../include -I../include/   -g -O2 -MT pq_tree.lo -MD -MP -MF .deps/pq_tree.Tpo -c -o pq_tree.lo pq_tree.cpp
-mv -f .deps/pq_tree.Tpo .deps/pq_tree.Plo
-/bin/bash ../libtool --silent  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I..  -I../include -I../include -I../include/   -g -O2 -MT planarity.lo -MD -MP -MF .deps/planarity.Tpo -c -o planarity.lo planarity.cpp
-mv -f .deps/planarity.Tpo .deps/planarity.Plo
-/bin/bash ../libtool --silent  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I..  -I../include -I../include -I../include/   -g -O2 -MT maxflow_ff.lo -MD -MP -MF .deps/maxflow_ff.Tpo -c -o maxflow_ff.lo maxflow_ff.cpp
-mv -f .deps/maxflow_ff.Tpo .deps/maxflow_ff.Plo
-/bin/bash ../libtool --silent  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I..  -I../include -I../include -I../include/   -g -O2 -MT maxflow_pp.lo -MD -MP -MF .deps/maxflow_pp.Tpo -c -o maxflow_pp.lo maxflow_pp.cpp
-mv -f .deps/maxflow_pp.Tpo .deps/maxflow_pp.Plo
-/bin/bash ../libtool --silent  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I..  -I../include -I../include -I../include/   -g -O2 -MT maxflow_sap.lo -MD -MP -MF .deps/maxflow_sap.Tpo -c -o maxflow_sap.lo maxflow_sap.cpp
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-/bin/bash ../libtool --silent  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I..  -I../include -I../include -I../include/   -g -O2 -MT components.lo -MD -MP -MF .deps/components.Tpo -c -o components.lo components.cpp
-mv -f .deps/components.Tpo .deps/components.Plo
-/bin/bash ../libtool --silent  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I..  -I../include -I../include -I../include/   -g -O2 -MT fm_partition.lo -MD -MP -MF .deps/fm_partition.Tpo -c -o fm_partition.lo fm_partition.cpp
-mv -f .deps/fm_partition.Tpo .deps/fm_partition.Plo
-/bin/bash ../libtool --silent  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I..  -I../include -I../include -I../include/   -g -O2 -MT ratio_cut_partition.lo -MD -MP -MF .deps/ratio_cut_partition.Tpo -c -o ratio_cut_partition.lo ratio_cut_partition.cpp
-mv -f .deps/ratio_cut_partition.Tpo .deps/ratio_cut_partition.Plo
-/bin/bash ../libtool --silent  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I..  -I../include -I../include -I../include/   -g -O2 -MT min_tree.lo -MD -MP -MF .deps/min_tree.Tpo -c -o min_tree.lo min_tree.cpp
-mv -f .deps/min_tree.Tpo .deps/min_tree.Plo
-/bin/bash ../libtool --silent  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I..  -I../include -I../include -I../include/   -g -O2 -MT dijkstra.lo -MD -MP -MF .deps/dijkstra.Tpo -c -o dijkstra.lo dijkstra.cpp
-mv -f .deps/dijkstra.Tpo .deps/dijkstra.Plo
-/bin/bash ../libtool --silent  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I..  -I../include -I../include -I../include/   -g -O2 -MT bellman_ford.lo -MD -MP -MF .deps/bellman_ford.Tpo -c -o bellman_ford.lo bellman_ford.cpp
-mv -f .deps/bellman_ford.Tpo .deps/bellman_ford.Plo
-/bin/bash ../libtool --silent  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I..  -I../include -I../include -I../include/   -g -O2 -MT bid_dijkstra.lo -MD -MP -MF .deps/bid_dijkstra.Tpo -c -o bid_dijkstra.lo bid_dijkstra.cpp
-mv -f .deps/bid_dijkstra.Tpo .deps/bid_dijkstra.Plo
-/bin/bash ../libtool --silent  --tag=CXX   --mode=link g++  -g -O2 -version-info 3:4:2   -o libGTL.la -rpath /usr/local/lib gml_scanner.lo gml_parser.lo edge.lo graph.lo node.lo dfs.lo biconnectivity.lo bfs.lo topsort.lo st_number.lo embedding.lo pq_node.lo pq_tree.lo planarity.lo maxflow_ff.lo maxflow_pp.lo maxflow_sap.lo debug.lo components.lo fm_partition.lo ratio_cut_partition.lo min_tree.lo dijkstra.lo bellman_ford.lo bid_dijkstra.lo  
-make[3]: Leaving directory '/home/gold/misc/src/regraphlet/regraphlet/orig/GTL-1.2.4/src'
-Making all in include
-make[3]: Entering directory '/home/gold/misc/src/regraphlet/regraphlet/orig/GTL-1.2.4/include'
-Making all in GTL
-make[4]: Entering directory '/home/gold/misc/src/regraphlet/regraphlet/orig/GTL-1.2.4/include/GTL'
-make  all-am
-make[5]: Entering directory '/home/gold/misc/src/regraphlet/regraphlet/orig/GTL-1.2.4/include/GTL'
-make[5]: Nothing to be done for 'all-am'.
-make[5]: Leaving directory '/home/gold/misc/src/regraphlet/regraphlet/orig/GTL-1.2.4/include/GTL'
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-make[3]: Leaving directory '/home/gold/misc/src/regraphlet/regraphlet/orig/GTL-1.2.4/include'
-Making all in tests
-make[3]: Entering directory '/home/gold/misc/src/regraphlet/regraphlet/orig/GTL-1.2.4/tests'
-make[3]: Nothing to be done for 'all'.
-make[3]: Leaving directory '/home/gold/misc/src/regraphlet/regraphlet/orig/GTL-1.2.4/tests'
-make[3]: Entering directory '/home/gold/misc/src/regraphlet/regraphlet/orig/GTL-1.2.4'
-make[3]: Leaving directory '/home/gold/misc/src/regraphlet/regraphlet/orig/GTL-1.2.4'
-make[2]: Leaving directory '/home/gold/misc/src/regraphlet/regraphlet/orig/GTL-1.2.4'
-make[1]: Leaving directory '/home/gold/misc/src/regraphlet/regraphlet/orig/GTL-1.2.4'
-cd tests; make runtests
-make[1]: Entering directory '/home/gold/misc/src/regraphlet/regraphlet/orig/GTL-1.2.4/tests'
-/bin/bash ../libtool --silent  --tag=CXX   --mode=link g++  -g -O2   -o bellman_ford_test bellman_ford_test.o ../src/libGTL.la 
-/bin/bash ../libtool --silent  --tag=CXX   --mode=link g++  -g -O2   -o graph_test graph_test.o ../src/libGTL.la 
-./bellman_ford_test
-Bellman Ford with positive edge weights
-check OK
-run OK
-Distances OK
-Predecessors OK
-Negative Cycle OK
-Bellman Ford with some negative edge weights
-check OK
-run OK
-Distances OK
-Predecessors OK
-Negative Cycle OK
-Bellman Ford with negative cycle
-check OK
-run OK
-Negative Cycle OK
-./graph_test
-Loading graph and preserving ids
-Loading OK
-Number of ids OK
-Loading graph and preserving ids
-Loading OK
-Number of ids OK
-make[1]: Leaving directory '/home/gold/misc/src/regraphlet/regraphlet/orig/GTL-1.2.4/tests'
-end of make

+ 0 - 8
README.md

@@ -54,11 +54,3 @@ License-Filename: LICENSE
   
 ![lgplv3](lgplv3.png)
   
-![gplv3](gplv3.png)
-  
-If you enjoyed this give it a thumbs-up <span>👍</span>
-  
-![european-software](european-software.png)
-  
-<span>🇳🇱</span>
-  

+ 0 - 4
graphlet/README.md

@@ -58,7 +58,3 @@ License-Filename: LICENSE
   
 ![lgplv3](lgplv3.png)
   
-If you enjoyed this give it a thumbs-up <span>👍</span>
-  
-<span>🇳🇱</span>
-  

+ 0 - 86
graphlet/config.h

@@ -1,86 +0,0 @@
-/* config.h.  Generated from config.h.in by configure.  */
-/* config.h.in.  Generated from configure.ac by autoheader.  */
-
-/* Year, month and day this program is compiled. */
-#define COMPILE_DATE "Fri 09 Jul 2021"
-
-/* System where this is compiled. */
-#define COMPILE_UNAME "Linux"
-
-/* major */
-#define GENERIC_MAJOR_VERSION 5
-
-/* micro */
-#define GENERIC_MICRO_VERSION 1
-
-/* minor */
-#define GENERIC_MINOR_VERSION 0
-
-/* major */
-#define GT_MAJOR_VERSION 5
-
-/* micro */
-#define GT_MINI_VERSION 1
-
-/* minor */
-#define GT_MINOR_VERSION 0
-
-/* Define to 1 if you have the <dlfcn.h> header file. */
-#define HAVE_DLFCN_H 1
-
-/* Define to 1 if you have the <inttypes.h> header file. */
-#define HAVE_INTTYPES_H 1
-
-/* Define to 1 if you have the <memory.h> header file. */
-#define HAVE_MEMORY_H 1
-
-/* Define to 1 if you have the <stdint.h> header file. */
-#define HAVE_STDINT_H 1
-
-/* Define to 1 if you have the <stdlib.h> header file. */
-#define HAVE_STDLIB_H 1
-
-/* Define to 1 if you have the <strings.h> header file. */
-#define HAVE_STRINGS_H 1
-
-/* Define to 1 if you have the <string.h> header file. */
-#define HAVE_STRING_H 1
-
-/* Define to 1 if you have the <sys/stat.h> header file. */
-#define HAVE_SYS_STAT_H 1
-
-/* Define to 1 if you have the <sys/types.h> header file. */
-#define HAVE_SYS_TYPES_H 1
-
-/* Define to 1 if you have the <unistd.h> header file. */
-#define HAVE_UNISTD_H 1
-
-/* Define to the sub-directory where libtool stores uninstalled libraries. */
-#define LT_OBJDIR ".libs/"
-
-/* Name of package */
-#define PACKAGE "graphlet-5.0.1.tar.gz"
-
-/* Define to the address where bug reports for this package should be sent. */
-#define PACKAGE_BUGREPORT "mooigraph@gmail.com"
-
-/* Define to the full name of this package. */
-#define PACKAGE_NAME "graphlet"
-
-/* Define to the full name and version of this package. */
-#define PACKAGE_STRING "graphlet 5.0.1"
-
-/* Define to the one symbol short name of this package. */
-#define PACKAGE_TARNAME "graphlet-5.0.1.tar.gz"
-
-/* Define to the home page for this package. */
-#define PACKAGE_URL "https://sourceforge.net/projects/gml4gtk"
-
-/* Define to the version of this package. */
-#define PACKAGE_VERSION "5.0.1"
-
-/* Define to 1 if you have the ANSI C header files. */
-#define STDC_HEADERS 1
-
-/* Version number of package */
-#define VERSION "5.0.1"

+ 1 - 0
graphlet/src/gt_example/gt_example.cpp

@@ -35,6 +35,7 @@
 
 int Gt_example_Init (Tcl_Interp* interp)
 {
+    /* here own algorithm can be added */
     return code;
 }
 

+ 1 - 1
graphlet/src/gt_lsd_sugiyama/gt_lsd_sugiyama.cpp

@@ -36,7 +36,7 @@
 
 int Gt_lsd_sugiyama_Init (Tcl_Interp* interp)
 {
-
+    /* see the original sources, this is a common matrix barycenter and priority algorithm described in the theory */
     return TCL_OK;
 }
 

+ 20 - 1
graphlet/src/gt_xdag/README.md

@@ -1,3 +1,22 @@
 # gt
   
-
+This does a node positioning using regions of nodes and that is different from other tools  
+  
+//  
+// position_nodes dag.cpp  
+//  
+// This function tries to improve the current node positions. This has to be  
+// done, because the last step we made was ordering and placing the nodes  
+// according to the order graph. That means that all nodes are now placed as   
+// far to the left as possible. Therefore our layout is not balanced at all.  
+// The idea behind this node improvement is a pendulum. We consider the nodes  
+// as balls and the edges as strings. We begin by fixing the nodes of the  
+// first level "on the ceiling". The balls on the second level swing to a  
+// balanced position caused by gravity and depending on their connections to  
+// their predecessors. After finishing the second level we fix the nodes of  
+// the second level and repeat that procedure until we reach the bottom. Then  
+// we turn the system upside-down, i.e. we fix the nodes of the last level  
+// "on the ceiling" and repeat the steps described above until we reach the  
+// top again.  
+//  
+  

+ 1 - 0
graphlet/src/gt_xdag/gt_xdag.cpp

@@ -30,6 +30,7 @@
 
 int Gt_xdag_Init (Tcl_Interp* interp)
 {
+    /* see the original sources to add here. */
 
     return TCL_OK;
 }